CDS

Accession Number TCMCG006C115168
gbkey CDS
Protein Id XP_013649239.1
Location complement(join(19081907..19082029,19082105..19082204,19082294..19082463,19082544..19082696,19082762..19082900,19082979..19083079,19083152..19083780,19083869..19084462,19084537..19084791,19084910..19085037,19085115..19085269,19085345..19085565,19085646..19085675,19085762..19085837,19085913..19086043,19086124..19086379,19086476..19086634,19086705..19086803,19086869..19087058,19087140..19087282))
Gene LOC106353947
GeneID 106353947
Organism Brassica napus

Protein

Length 1283aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013793785.2
Definition paired amphipathic helix protein Sin3-like 4 isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category B
Description Paired amphipathic helix protein Sin3-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11644        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04139        [VIEW IN KEGG]
ko04919        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
map04139        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
GOs GO:0000118        [VIEW IN EMBL-EBI]
GO:0000122        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTGGAGGAGGAGGAAGTGCGCAGAAGCTGACTACAAATGATGCACTTGCGTATCTCAAAGCTGTCAAGGATAAGTTTGCAGATAAACGCGAAAAGTATGATGAGTTTCTTGAGGTCATGAAAGATTTTAAAGCTCAGAGAGTTGATACTAGTGGTGTCATCTTGAGGGTGAAAGAGCTATTCAAAGGGAACCGAGAGCTCATCTTGGGTTTCAATACTTTCTTACCAAAGGGGTTTGAGATAACCCTCTTACCTGAAGAAGATGACCAACCTCTCCCAAAGAAGCCTGTTGAGTTTGAGGAAGCTATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAGGGTGATGACCGAGTATACAAATCGTTTTTAGACATTCTGAATATGTATAGAAAGGAGAACAAGTCCATTACTGAGGTCTACCAGGAGGTGGCTATTCTTTTCCGGGACCATCATGATTTACTTGTGGAGTTCACTCACTTTCTCCCTGACACTTCAGGGACTACCTCTACTAATGATCTTGTGAAAATGTCTGTACGTGACCGAGGAGGCTTTAAATCTCTTCCCACCATTCGTGACTCTGATAAGAAGGACCGGATCAATGACCTCAAAACTGAACATATGGAGCTAGACCAGGAGAGATCTTTGTTGAAAGAAAGTAAAGAAGACGTTAGACGCATTGACAAAAAAAATGATTACTCGGATGATCAGAAAGGGCAGTTCCTCCACAGTAAGAAGAAGCTGACACTAAGGGATGAAGATTCTACTGAAACCTCGAATCAGGGTAGAGAAGGAGACAAGTTTTGTGGAGCCATTGCCACTTCATCTACTAAAGATGATAAAGGCCATGTCCAAGAGCTTGCTTTTGTTGATCGAGTGAAGGCAAAGCTTAGTAGCTCTGAGTACCAAGAGTTCTTACGATGTCTTAATCTCTTTTCAAAGGAAATAATCAGCCAACCAGAGCTGCAGTCTTTGGTGGGCAATCTAATTGGAGGATATCCAGATCTCATGGAAGCCTTCAGAGTCTTTTTGGTTCAGTGTGAAAAGAATGATGGATTACTCTCTAGTGTTGTGACTAAGAAATCCTTGTGGAGTGATGGCAAATGTCCGCAGCCTACTAAGTCACAGGACAAAGATACAGAACGAGAACGTGAGAAGACTGAAAGGCTTAGAGAAAGAGATCGAGAGAAGGAGAGGCTTGAAAAGGCGGCAGCGAGCCAGAAATGGGCTAAACCTATCAGCGAACTAGATCTCTCCAACTGTGAACAATGCACTCCTAGTTACCGGTTACTTCCAAAGAATTATCCAATTCCTATTGCAAGCCAAAAAATGGAGATTGGCAGCCAGGTGCTTAATGACCATTGGGTCTCTGTCACTTCAGGAAGTGAAGATTATTCATTCAAACACATGCGTAAGAACCAGTACGAAGAGAGCCTCTTCCGTTGTGAAGATGACAGGTTCGAGCTAGACATGCTATTAGAGTCTGTGAACTCAGCTACGAACCGAGTGGAAGAGTTATTAGCAAAGATTAACAATAATGAATTGAAAACCGATACTCCCATCTGTATAGAGGATCACCTCACAGCTCTAAACATAAGGTGCATAGAACGTTTATACGGTGACCACGGGCTGGATGTGATTGATTTGTTAAAGAAGAATGCATATCTTGCTTTACCTGTAATACTGACACGTTTGAAACAGAAACAAGAAGAATGGGGAAGGTGTCGTTCTGAGTTTAACAAAGTGTGGGCTGATATATACACCAAGAACTACCACAGATCACTTGATCATCGCAGTTTCTATTTCAAACAGCAGGATTCAAAGAATCTGAGCGCAAAAGCTTTGTTGGCAGAGATAAACGAGATCTCTGAGAAGAAGCGAGGAGAGGATGATGCGCTTCTTGCTCTTGCTGCTGGAAACAGAAGAACTATTTGTTCCAGCATGAGTTTTGATTATCCGGATCCTGATCTTCACGAGGATCTTTATCAGCTGATCAAGTATTCTTGTGGAGAAATGTGTTCAACCGAGCAGCTAGATAAGGTGATGAAGGTATGGACAGAGTTTTTGGAACCGATGTTTGGTGTTCCTTCTCGCCCTCAAGTTGCTGAGGACCAAGAAGATGCTATCAAGACTACTACGAACCAGAATTTAAAAACTGGTGATGCAAGCGAGGATAGTCCTCAAAATGGAGCTACGGTTGCCAGCACTGTGCGGTCAAATGGCCCTCGAAAAGCCGATAGAGATTTCACTGCTAGTAAGTCCTCAGATGACAACATTCAGAATGATAAAATGCGGAAAAATCTAAGCACACCTGAAGAAAGGCCTGAAACCAAAGAAGCTGTTACTATTGAACGTGTGCATAGCTCAAATTCACCACCTGTAGATGGATTGATACCTCAAAGGAATGGGAAAACCAGCGTTTTATCCATTGTTGGGCTTAGCAATAGTACTCCAAAACCTGGTGGTTTAACCAGTGGAACGGAGATGGAGTCGAAGCCAAACCACGTAAATGGTACATTGGCTGAAACATCGAATAATCAAAGATCTAACGAAGTCTCTGCTGGAGAAACCAAAGTTGAAAGAGAGGAAGGTGAGCTTTCTCCAACGGGAGATTTTGAGGAAGATAACTTTGCAGAGAATGACTTGGATGCTCTCAGCAATGGTAAGGATGATGCTGGGAATAACTTAAACCAGAGAAGTAGTGGAGAGAATGATGAAGGTGATGAAAGTGCACCAAGATCATCAGATGGCAGCGGAAACACATCTCATAACGGTGATGTTTCTGGAACTGAGTCTGGTGATGGTGAACAAGATTGTTACCCTGAAGATGATAATAAGGTAGAAAGTGAAGGTGAGGCTGAAGCTGAAGAAGGTATGTCTGATGCTGAAGGAGATAGGCCTGTGTTACCCGTTTATGTGCGAAACTTGCTGCATGCGAAGCCTCTGTCTAAGTATGTCCCTCCAGCTATACTCGATAAGGACAACAAAGATGATTCTCAGAAGAAGAACTCAATAGTCTTTTATGGGAATGACTCTTATTACGTTCTTTTCAGACTTCATCAGATTTTGTATGAGAGAATATTATCAGCAAAGATCAATTCATCGTGTCCTGAAAGAATGTGGAAGACCTCAAATTCAACAAACCCTGCAGATTCCTACGCCAGATTCATGAATGCTCTCTACAACTTGCTTGATGGCACGTCTGATAACTCCAAGTTTGAAGATGATTGCCGAGCAATAATTGGGACACAGTCATATGTTCTCTTCACATTAGACAAACTGATCTACAAGCTCATCAAGCATCTCCAAGTAGTAGCAGCTGATGAGATGGACAGCAAACTACAACAGCTATATTCATATGAGAAATCAAGAAAGCCTGAGAAGTACTTCGATGATGTTTATTATGAAAACGCTCGTGTTCTTCTTCCTGATGAAGATGTGTACCGCATTGAATGTGAGCTTTCAGCACAAACAACAAAGTTATCTATTCAGCTTCTGGACTATGGACATGATAAGCCTGATGTGACATCCATATCCATGGACCCAACTTTTACAGCTTACCTCCAAAACAAGTTCCTTTCCAGTCAAGCTAAGGTGAAGGAGAATCCTCGAATCTATCTAAACCGGAATAAGCGTAAAAATGGTGATGACGATGAACTCTGCACCACGGATGGAGTTAAGATTATAAACGGTTTGGAGTGTAAGATAACATGCAGTTCTTCAAAGGTCTCATATGTATTTGACACAGAGGATGTATTGCATCGTGTTAAGAAGAGGAAGGTTTCGAGTGGTTCTATAATTAGGGAAAGGAGGATACAAAGATACCAAAAACTTCTCACCAGCCAATGA
Protein:  
MVGGGGSAQKLTTNDALAYLKAVKDKFADKREKYDEFLEVMKDFKAQRVDTSGVILRVKELFKGNRELILGFNTFLPKGFEITLLPEEDDQPLPKKPVEFEEAISFVNKIKTRFQGDDRVYKSFLDILNMYRKENKSITEVYQEVAILFRDHHDLLVEFTHFLPDTSGTTSTNDLVKMSVRDRGGFKSLPTIRDSDKKDRINDLKTEHMELDQERSLLKESKEDVRRIDKKNDYSDDQKGQFLHSKKKLTLRDEDSTETSNQGREGDKFCGAIATSSTKDDKGHVQELAFVDRVKAKLSSSEYQEFLRCLNLFSKEIISQPELQSLVGNLIGGYPDLMEAFRVFLVQCEKNDGLLSSVVTKKSLWSDGKCPQPTKSQDKDTEREREKTERLRERDREKERLEKAAASQKWAKPISELDLSNCEQCTPSYRLLPKNYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNSATNRVEELLAKINNNELKTDTPICIEDHLTALNIRCIERLYGDHGLDVIDLLKKNAYLALPVILTRLKQKQEEWGRCRSEFNKVWADIYTKNYHRSLDHRSFYFKQQDSKNLSAKALLAEINEISEKKRGEDDALLALAAGNRRTICSSMSFDYPDPDLHEDLYQLIKYSCGEMCSTEQLDKVMKVWTEFLEPMFGVPSRPQVAEDQEDAIKTTTNQNLKTGDASEDSPQNGATVASTVRSNGPRKADRDFTASKSSDDNIQNDKMRKNLSTPEERPETKEAVTIERVHSSNSPPVDGLIPQRNGKTSVLSIVGLSNSTPKPGGLTSGTEMESKPNHVNGTLAETSNNQRSNEVSAGETKVEREEGELSPTGDFEEDNFAENDLDALSNGKDDAGNNLNQRSSGENDEGDESAPRSSDGSGNTSHNGDVSGTESGDGEQDCYPEDDNKVESEGEAEAEEGMSDAEGDRPVLPVYVRNLLHAKPLSKYVPPAILDKDNKDDSQKKNSIVFYGNDSYYVLFRLHQILYERILSAKINSSCPERMWKTSNSTNPADSYARFMNALYNLLDGTSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLIKHLQVVAADEMDSKLQQLYSYEKSRKPEKYFDDVYYENARVLLPDEDVYRIECELSAQTTKLSIQLLDYGHDKPDVTSISMDPTFTAYLQNKFLSSQAKVKENPRIYLNRNKRKNGDDDELCTTDGVKIINGLECKITCSSSKVSYVFDTEDVLHRVKKRKVSSGSIIRERRIQRYQKLLTSQ